@joanampereira
Biochemist turned computational biologist and inner astronaut navigating the vastness of the protein universe using 💻. Group leader at @vibai.bsky.social and kuleuvenuniversity.bsky.social🇧🇪 Previously in🇨🇭🇩🇪🇵🇹 🌌 https://pereiralab.sites.vib.be
If you are at PASC25 this year, go listen to Reto talk about his master thesis work on rescaling GCsnap2. It was awesome to have Reto with us last year and collaborate so close with the @cflorina.bsky.social and @dmi-hpc.bsky.social to make our tool even more useful!
🧬Great lineup of speakers!
@rommieamaro.bsky.social @jessicaandreani.bsky.social @gauravbhardwaj.bsky.social @bonomimax.bsky.social @rocovino.bsky.social @bioinfo.se Sergei Grudinin @magistratolab.bsky.social Christine Orengo @joanampereira.bsky.social Maya Topf, Sameer Velankar, Basile Wicky
Joana Pereira @joanampereira.bsky.social on protein annotation by AI #ML4NGPVilnius
Really excited to share our resource and analysis of AlphaFold-predicted monomers and homodimers across viruses and phages. Project driven by fab PhD student @rodai.bsky.social and with our great collaborators Joana Pereira @joanampereira.bsky.social and @ninjani.bsky.social
VIB.AI's International PhD call is now open!
https://tinyurl.com/53nc9vnd
If you're interested in applying AI to biology, take a look at the PhD projects across our labs.
🗓️ Deadline: June 22nd
Come join us in Leuven or Ghent 😎
So honoured and excited for being awarded a FWO Odysseus grant! This means, the Pereira lab will be hiring soon. Stay tuned 😃
Apply now for our international Master of Science in Physics of Life @biozentrum.unibas.ch @unibasel.ch! Scholarships available.
More information: www.biozentrum.unibas.ch/education/de...
#Master #Students #Research #Physics #Mathematics #ComputerScience #Engineering #Basel #Switzerland
Review alert - "Modelling and design of transcriptional enhancers" by Seppe and Vasilis 👇
Congratulations Santiago!! I am so happy for you and so much looking forward to see the fruits of your lab in Geneva 😃😃
Hopefully a lot of cool science will come out of here for many many years 🌌 Let the journey begin 🚀🧑🚀👩🏫 @vibai.bsky.social @kuleuvenuniversity.bsky.social
Oh yeah!! Congratulations 🍻🎉🥂🤓
For future reference, this is the slide (without the bottom cropped) that should have been posted here. Boltz-1 and AF3 are actually performing similarly on the Chymase and Mpro datasets, and differ only on the Autotaxin dataset for still unknown reasons.
Full house today for Bruno's talk today at our BC2 seminar series @biozentrum.bsky.social
Full house and a filled schedule today. Some snapshots of the last session of the day, with talks by @benlehner.bsky.social, David Kelley and Tanja Kortemme. 📸 #VIBAIsymposium
Fantastic start of the #VIBAIsymposium this morning with a welcome by our scientific director @steinaerts.bsky.social and talks by Julien Gagneur and @avsecz.bsky.social
Good morning! Ready to welcome you at #VIBAIsymposium.
My first post on Blue Sky - moving over !
For all post-docs out there - fantastic opportunity @EMBL. Independent group leader position: Core funding, state-of-the-art core facilities, access to fantastic Ph.D. students, and of course amazing colleagues. Please apply www.embl.org/jobs/positio...
With the deluge of new friends - if you are or know someone who is a looking for a position as computational scientist (any level) in #pancreaticcancer, #macrophages #spatialbiology #singlecell... we might have something for you. Will also consider wet lab ppl, send email if interested. pls repost!
I haven’t come across this starter pack yet, so I made one! 👉 Check out the "Protein Prediction & Design" Starter Pack and join the conversation.
Think someone should be included? Tag them below! 👇
🧬🧶
go.bsky.app/C1oNcnj
I’m happy to support an AI Fellow at EPFL in my group! ⬇️
Aside from our applied #AI4Science work, we are excited to push on fundamental problems in #ML
Here is some recent fundamental work: arxiv.org/abs/2410.10744 & sslneurips23.github.io/paper_pdfs/p...
www.epfl.ch/research/fun...
This was way back when I was still using pipettes. I was helping a PhD student filling in a box of tips and when it was almost full, pushed it too hard and spilled them all on the floor 🙈
🚨The future Pereira lab is hiring!
We will start at @vibai.bsky.social in Feb 2025 and are looking for a postdoc to join our team 🤓
If you want to leverage AI and large networks to explore and understand the protein universe 🌌, check below!
*deadline: 21 Nov 2024*
jobs.vib.be/j/93314/post...
We have a great list of already confirmed speakers and keynotes! Deadline for abstracts: December 15!
www.iscb.org/3dbioinfo202...
Big announcement 📢🚨
The ISCB 3DSig together with the 3DBioinfo @ELIXIREurope community we are organising a joint conference in Barcelona March 19-21, 2025!
If you work in Structural Bioinformatics or Computational Biophysics communities register ASAP! Only 120 spots!
www.iscb.org/3dbioinfo202...
We're thrilled to announce Joana Pereira will join VIB.AI as group leader!
Her pioneering research combines deep learning, network analysis, and bioinformatics to investigate protein diversity and evolution.
👉 vib.ai/en/news/joan...
Welcome aboard, Joana!
PhD program poster
[Please repost] Looking for a PhD program that goes from molecules to ecosystems? Look no further, and apply to us! I'm offering two projects, on the 1001 Genomes Plus project and on investigating functional diversity in the plant immune system
www.phd.tuebingen.mpg.de/8387/detlef-...
It is a great privilege and honor to be elected as new President of the SNSF Research Council. I’m very much looking forward to serving the Swiss scientific community in this new role in the coming years.
snf.ch/en/xgVKfkp88...
Join the Master's programme in Biochemistry with specialisation in protein chemistry at the Department of Biochemistry and Biophysics of Stockholm University. The international application round is open: www.su.se/english/sear...