Feiyang Huang

Pleased to share our preprint from the Tansey lab at @mskcancercenter.bsky.social: the Pan-PreClinical (PPC) project.

To mitigate biases in immortalized cell line screens, we curated an atlas of >2M experiments in ~2k patient-derived ex vivo constructs using 3k+ drugs.

Interactive web portal here

mRNABench: A curated benchmark for mature mRNA property and function prediction Messenger RNA (mRNA) is central in gene expression, and its half-life, localization, and translation efficiency drive phenotypic diversity in eukaryotic cells. While supervised learning has widely bee...

We are excited to introduce mRNABench, a comprehensive benchmarking suite that we used to evaluate the representational capabilities of 18 families of nucleotide foundation models on mature mRNA specific tasks.

Paper: doi.org/10.1101/2025...
Code: github.com/morrislab/mR...

A 🧵

Canjam'25 feels like yet another ML conference

Would love to!