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Typhaine Paysan-Lafosse

@typhainepl

She/Her. Project leader at @ebi. Developer. STEM ambassador. Creator of the Protein families game. Traveller. Photo. SBK dancer.

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20.11.2024
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Latest posts by Typhaine Paysan-Lafosse @typhainepl

Looking forward to presenting our latest work in Pfam at @jobim2025.bsky.social this week!

07.07.2025 08:25 πŸ‘ 2 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Want to use the InterPro API but not sure how to start? Join this upcoming workshop, where @typhainepl.bsky.social will guide you through the fundamentals and practical applications. Discover how to integrate this powerful tool into your workflow! Register now to secure your spot. πŸ’»πŸ§ͺ

02.04.2025 09:36 πŸ‘ 4 πŸ” 2 πŸ’¬ 0 πŸ“Œ 0
InterProScan Version: 5.73-104.0
6th February 2025

InterProScan Version: 5.73-104.0 6th February 2025

Databases updates:
Pfam 37.2
NCBIfam 17.0
CDD 3.21

Databases updates: Pfam 37.2 NCBIfam 17.0 CDD 3.21

Ways to access:
1) InterPro website: sequence search
2) Local installation
Software download
Docker container

Ways to access: 1) InterPro website: sequence search 2) Local installation Software download Docker container

πŸ†• New version of InterProScan: 5.73-104.0
3 ways to use it:
1️⃣ Sequence search on the InterPro website: ebi.ac.uk/interpro/sea...
2️⃣ Local installation: interproscan-docs.readthedocs.io/en/v5/Instal...
3️⃣ Local installation using a container: interproscan-docs.readthedocs.io/en/v5/HowToU...
πŸ’»πŸ§ͺ

25.02.2025 11:22 πŸ‘ 3 πŸ” 3 πŸ’¬ 0 πŸ“Œ 0
InterPro 104.0
6th February 2025

InterPro 104.0 6th February 2025

Databases udpates:
Pfam 37.2, NCBIfam 17.0, CDD 3.21

Databases udpates: Pfam 37.2, NCBIfam 17.0, CDD 3.21

661 new entries, containing:
663 Pfam 
5 NCBIfam
5 PANTHER 
9 CDD

661 new entries, containing: 663 Pfam 5 NCBIfam 5 PANTHER 9 CDD

New features:
Redesigned protein viewer for sequence searches
Wikipedia articles for Pfam clans
Addition of PTM from the PRIDE database

New features: Redesigned protein viewer for sequence searches Wikipedia articles for Pfam clans Addition of PTM from the PRIDE database

πŸ”ˆInterPro release 104.0 is live!
✨Update to Pfam 37.2, NCBIfam 17.0, CDD 3.21.
✨661 new entries, including 682 signatures from the Pfam (663), NCBIfam (5), PANTHER (5), CDD (9) databases. Have a look: ebi.ac.uk/interpro/ πŸ’»πŸ§ͺ

06.02.2025 14:19 πŸ‘ 3 πŸ” 4 πŸ’¬ 0 πŸ“Œ 0
Parkinson's disease molecular mechanisms.
Source: https://www.thelancet.com/journals/lancet/article/PIIS0140-6736(14)61393-3/fulltext#fig3

Parkinson's disease molecular mechanisms. Source: https://www.thelancet.com/journals/lancet/article/PIIS0140-6736(14)61393-3/fulltext#fig3

🧬πŸ§ͺπŸ’» New blog post: Diving deep into the key proteins behind Parkinson's disease. From Ξ±-synuclein to LRRK2, we're unravelling the molecular mysteries that could hold the key to treatment breakthroughs. Read more: proteinswebteam.github.io/interpro-blo... #Parkinsons #Neuroscience

31.01.2025 16:19 πŸ‘ 3 πŸ” 1 πŸ’¬ 0 πŸ“Œ 1