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Jelle Spooren

@jellespooren

Post-doc at ETH-Zürich and former PhD at Utrecht University. Studying the assembly and evolution of disease-suppressive plant-associated microbiomes.

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06.02.2025
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Latest posts by Jelle Spooren @jellespooren

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Downy mildew disease–suppressive soils transmit a protective core microbiome to the phyllosphere Abstract. Plants can respond to pathogen attack by assembling disease-suppressive microbiomes. In Arabidopsis thaliana, infection by the obligate foliar do

New paper out now!

Proud that also the final chapter of my PhD is now available. In this study published in ISME J, we show a crucial transgenerational link between belowground and aboveground microbiomes for plant protection against downy mildew disease.

Enjoy!

academic.oup.com/ismej/articl...

24.02.2026 09:13 👍 1 🔁 0 💬 0 📌 0
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Downy mildew disease-suppressive soils transmit a protective core microbiome to the phyllosphere Abstract. Plants can respond to pathogen attack by assembling disease-suppressive microbiomes. In Arabidopsis thaliana, infection by the obligate foliar do

Downy mildew disease-suppressive soils transmit a protective core microbiome to the phyllosphere

#ISMEJournal by @jellespooren.bsky.social et al from @rlberendsen.bsky.social
@utrechtpmi.bsky.social @cornepieterse.bsky.social @svanwees.bsky.social

academic.oup.com/ismej/advanc...

12.02.2026 08:33 👍 12 🔁 5 💬 0 📌 0

Differential contributions of an antimicrobial effector from Verticillium dahliae to virulence and tomato microbiota assembly across natural soils https://www.biorxiv.org/content/10.1101/2025.09.30.679524v1

02.10.2025 15:04 👍 8 🔁 5 💬 0 📌 1
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Born to rewild: Reconnecting beneficial plant-microbiome alliances for resilient future crops Plant domestication is a coevolutionary process shaped by human selection, favoring traits supporting modern-day agriculture. This process has reduced…

Born to rewild: Reconnecting beneficial plant-microbiome alliances for resilient future crops

@cp-cellhostmicrobe.bsky.social review by Dario X. Ramirez-Villacis, Antonio Leon-Reyes, @cornepieterse.bsky.social and Jos Raaijmakers @niooknaw.bsky.social

www.sciencedirect.com/science/arti...

14.08.2025 08:08 👍 10 🔁 8 💬 0 📌 0

Really nice work from @jellespooren.bsky.social showing that disease-suppressive soils might sometimes be generated in the phyllosphere. Turning the concept of soilborne legacies upside down 🌱🦠 With @cornepieterse.bsky.social @svanwees.bsky.social and others @utrechtpmi.bsky.social

18.06.2025 06:50 👍 24 🔁 11 💬 2 📌 0

@rlberendsen.bsky.social
@cornepieterse.bsky.social
@utrechtpmi.bsky.social

17.06.2025 20:34 👍 0 🔁 0 💬 0 📌 0

We investigate the disease-induced assembly of a core microbiome that protects plants against downy mildew disease, focussing on the relationship between the rhizosphere and phyllosphere. Turns out: the phyllosphere emerges as a key hub for the accumulation of disease-suppressive soil microbiomes!

17.06.2025 20:33 👍 1 🔁 0 💬 0 📌 0
LinkedIn This link will take you to a page that’s not on LinkedIn

Proud to share our latest pre-print manuscript entitled 'Downy mildew disease-suppressive soils transmit a protective core microbiome to the phyllosphere' (lnkd.in/dBk28gnT). Super cool to see the final chapter of my PhD at the Plant-Microbe Interactions group of Universiteit Utrecht now online!

17.06.2025 20:31 👍 10 🔁 6 💬 2 📌 1
PhD position: Ecology and Genomics of Phyllosphere Yeasts The phyllosphere - the aerial parts of plants - harbors a rich and diverse microbial community, including bacteria, filamentous fungi, yeasts and viruses. This environment is both harsh and dynamic, e...

🚨 Open position
We are hiring a PhD student to investigate the ecology and genomics of phyllosphere yeasts combining lab experiments with computational approaches. Joins us at @niooknaw.bsky.social in collaboration with @micropresearch.bsky.social @cmelkonian.bsky.social @marnixmedema.bsky.social

22.05.2025 05:57 👍 8 🔁 7 💬 0 📌 0

Super proud, thanks for your dedication and effort @hugo Pantigoso @adamoss.bsky.social @gstringlis.bsky.social

21.05.2025 17:10 👍 4 🔁 2 💬 0 📌 0

Ik neem graag deel!

17.02.2025 16:36 👍 1 🔁 0 💬 1 📌 0