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Yong E. Zhang

@pkuzhangy

Evolutionary geneticist, new gene origination, transposable element

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24.01.2025
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Latest posts by Yong E. Zhang @pkuzhangy

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Call for Abstracts Open! The 4th AsiaEvo conference will be held at Kumming, China Dec 8-11 2025. We are organizing Symposium 3 aiming for a broad discussion on organismsโ€™ adaptation under global change, from bacteria to large mammals. Also check other symposium topics that attract you!

29.09.2025 19:59 ๐Ÿ‘ 7 ๐Ÿ” 4 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 1
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We are organizing a symposium in the 4th AsiaEvo Conferenence this December in #Kunming about #appendage featuring the Palentologist Xing Xu at IVPP, Dev. biologist Cheng-Ming Chung from USC and evodevoist @MonteiroLab Antonia Monteiro from NUS. Submit your abstract now!

18.08.2025 03:18 ๐Ÿ‘ 0 ๐Ÿ” 2 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0
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[conf alert] The 4th AsiaEvo Conf. in Kunming, China, Dec 8-11, 2025. Join scholars and young researchers to explore cutting-edge #evobio. Free registration for researchers from SouthEast Asia countries. For submission see instructions at
2025asiaevoconf.casconf.cn #AsiaEvo2025 #AsiaEvo

26.08.2025 02:38 ๐Ÿ‘ 3 ๐Ÿ” 2 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 2

Many thanks, Cedric!

03.10.2025 08:06 ๐Ÿ‘ 1 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

8/8 I appreciate that Caixia invited me to join this exciting scentific journey. This discovery was only possible through a team effort. Huge thanks and congrautulations to all collaborators!

01.10.2025 10:40 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0

7/8 Studying TranCs mirrors the classical framework of studying new gene origins: identify recent transitions, compare ancestral and derived states, infer key steps.

01.10.2025 10:40 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0

6/8 Why did Cas12 evolve repeatedly, while Cas9/Cas13 seemingly arose only once? We discuss that the huge diversity of TnpB transposons & the high evolvability of RNA created the perfect storm for recurrent origins, a potential case of molecular contingency.

01.10.2025 10:39 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0

5/8 We engineered this transition: by artificially splitting ISDra2 TnpBโ€™s reRNA into tracrRNA and crRNA, we converted it into a functional CRISPR-like system. This confirms RNA splitting was a key step in Cas12 emergence.

01.10.2025 10:39 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
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4/8 Cryo-EM shows TranC (LaTranC) protein is structurally similar to its TnpB ancestor. The key innovation was at the RNA level: the guide reRNA functionally split into a tracrRNA & crRNA. Computional analysis indicate it as a convergent event across TranC clades.

01.10.2025 10:38 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
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3/8 These TranCs (e.g., LaTranC) are true intermediates: they can be guided by both CRISPR crRNAs AND transposon-derived reRNAs! This dual-guide capacity shows they retain ancestral TnpB function while acquiring CRISPR immunity.

01.10.2025 10:38 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
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2/8 Phylogenetic mining revealed several young Cas12 clades we call โ€œTranCsโ€, i.e., nascent CRISPR systems emerging from distinct TnpB lineages. These represent multiple independent domestication events from transposons.

01.10.2025 10:37 ๐Ÿ‘ 0 ๐Ÿ” 0 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0

1/8 Our new paper w/ Drs. Caixia Gao & Gogo Liu groups reveals how #CRISPR-Cas12 systems evolved from transposon-encoded TnpB nucleases through RNA splitting by analyzing โ€œTranCโ€ systems (evolutionary intermediates bridging selfish elements and adaptive immunity). #Evolution

01.10.2025 10:35 ๐Ÿ‘ 8 ๐Ÿ” 3 ๐Ÿ’ฌ 2 ๐Ÿ“Œ 0
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SMBE 2025 (July 20-24 in Beijing, China) is now open for abstract submission. We have a symposium for TE folks: Transposable Elements in Genome Evolution and Biotechnology Development. Please spread the message and submit your abstract. See you in Beijing.

23.12.2024 10:52 ๐Ÿ‘ 3 ๐Ÿ” 3 ๐Ÿ’ฌ 1 ๐Ÿ“Œ 0
SMBE 2025 - Annual Meeting of the Society for Molecular Biology & Evolution, 2025 2025ๅนดๅ›ฝ้™…ๅˆ†ๅญไธŽ็”Ÿ็‰ฉ่ฟ›ๅŒ–๏ผŒๅœจ็บฟไผš่ฎฎ๏ผŒไผš่ฎฎ็›ดๆ’ญๅนณๅฐ๏ผŒ็ฝ‘็ปœไผš่ฎฎ็›ดๆ’ญ๏ผŒ็พŽ่ฟชๅบทไผšๅŠก้€š๏ผŒๅญฆๆœฏไผš่ฎฎ็ฎก็†็ณป็ปŸ๏ผŒไผš่ฎฎๆดปๅŠจ็ฎก็†๏ผŒๆณจๅ†Œ็ญพๅˆฐ็ฎก็†๏ผŒไผšๅœบๅนป็ฏ็‰‡ไผ ่พ“่ฝฌๆ’ญ๏ผŒPPTไผ ่พ“๏ผŒไผš่ฎฎ็ฝ‘็ปœ็›ดๆ’ญ๏ผŒ็”ตๅญๅฃๆŠฅ็ฎก็†็ณป็ปŸ๏ผŒๅŒปๅญฆไผš๏ผŒไผšๅ‘˜็ฎก็†็ณป็ปŸ

Abstract submission for SMBE2025 in Beijing is open. If you study gene duplication or new genes, please consider submitting an abstract for a talk for Symposium 7, The Origin, Evolution, and Phenotypic Contributions of New Genes. smbe2025.scimeeting.cn/en/web/index.... Deadline is Jan 30, 2025.

22.01.2025 16:48 ๐Ÿ‘ 1 ๐Ÿ” 2 ๐Ÿ’ฌ 0 ๐Ÿ“Œ 0