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Christa Caggiano

@christacaggiano

Bioinformatics PhD 🧬🧬🧬 Postdoc at the Institute for Genomic Health at Mount Sinai

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15.11.2024
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Latest posts by Christa Caggiano @christacaggiano

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Epigenetic profiles of tissue informative CpGs inform ALS disease status and progression - Genome Medicine Background Cell-free DNA (cfDNA), derived from dying cells, has demonstrated utility across multiple clinical applications. However, its potential in neurodegenerative diseases remains underexplored, ...

So happy to see my last PhD paper published, focusing on cfDNA in detecting and monitoring ALS

link.springer.com/article/10.1...

20.10.2025 17:23 πŸ‘ 2 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Preprint alertπŸ“œ: How do lifetime viral exposures shape our immune system response to future infections? 🦠🧬

We explore this question in our new preprint, led by postdoc
Chad Hogan.

biorxiv.org/content/10.1...

#SystemsImmunology #Immunology #Virology #Infection #HostResponse

17.09.2025 14:48 πŸ‘ 2 πŸ” 2 πŸ’¬ 1 πŸ“Œ 0

This is the last week to take our survey! If you're an early career researcher in human genetics and have some time, please consider taking our survey on how you use population descriptors πŸ˜‡

It's a study run by trainees with the goal of improving trainee research quality!

11.08.2025 20:33 πŸ‘ 0 πŸ” 1 πŸ’¬ 0 πŸ“Œ 0

please feel free to share! i'll DM you the link

26.06.2025 14:31 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

Yes not ideal hours for Israelis. If enough people are interested we can always discuss time change! I dmed you the zoom :)

25.06.2025 20:53 πŸ‘ 1 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0

If you're interested in preprints and genomics please feel welcome to come to this meeting! Open to all!

We review 2 preprints a month and create written reviews, which have the opportunity to be published in @cp-trendsgenetics.bsky.social

25.06.2025 15:08 πŸ‘ 2 πŸ” 2 πŸ’¬ 2 πŸ“Œ 0
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SPC: a SPectral Component approach to address recent population structure in genomic analysis Population structure is a well-known confounder in statistical genetics, particularly in genome-wide association studies (GWAS), where it can lead to inflated test statistics and spurious associations...

πŸ“’ Just posted: Our preprint introducing SPC β€” Spectral Components β€” is now live on medRxiv!

Led by Dr. Ruhollah Shemirani and years in the making, this method offers a robust, scalable way to adjust for recent population structure in genomic analyses.
πŸ”— www.medrxiv.org/content/10.1...

1/9

17.06.2025 16:26 πŸ‘ 37 πŸ” 15 πŸ’¬ 1 πŸ“Œ 0

This survey is based on the combined efforts of a lot of other really smart/col human genetics trainees, including: @jayatirsharma.bsky.social @roshnipatel.bsky.social
@raungar.bsky.social @dianexue.bsky.social @jpflores.rbind.io

05.06.2025 17:21 πŸ‘ 3 πŸ” 2 πŸ’¬ 0 πŸ“Œ 0
flyer advertising the survey for human genetics trainees

flyer advertising the survey for human genetics trainees

Are you an early-career researcher working on the computational analysis of population-level human genetics data? We want to hear from you about if, how, and why you use population descriptors in your research! Fill out our short survey: forms.gle/SCiNUq71wgi5...

05.06.2025 17:19 πŸ‘ 8 πŸ” 11 πŸ’¬ 1 πŸ“Œ 1
Do you work with human computational genetic/genomics data? Are you a trainee or early career scientist? Take our survey! And participate in our research study on how you use population descriptors in your work 

Survey link and QR Code are in the flyer

Do you work with human computational genetic/genomics data? Are you a trainee or early career scientist? Take our survey! And participate in our research study on how you use population descriptors in your work Survey link and QR Code are in the flyer

Are you an early-career researcher working on the computational analysis of population-level human genetics data? We want to hear from you about if, how, and why you use population descriptors in your research! Fill out our short survey: forms.gle/SCiNUq71wgi5...

02.06.2025 17:32 πŸ‘ 10 πŸ” 6 πŸ’¬ 1 πŸ“Œ 0
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From the askscience community on Reddit Explore this post and more from the askscience community

I'm doing an AMA as part of the @geneticssociety.bsky.social DNA Day 2025! Feel free to ask me anything (genetics related) :) #DNADay2025

redd.it/1k7i3t1

25.04.2025 15:15 πŸ‘ 7 πŸ” 8 πŸ’¬ 0 πŸ“Œ 0

PRS for how good you are at doing drone strikes??

08.02.2025 01:58 πŸ‘ 1 πŸ” 0 πŸ’¬ 1 πŸ“Œ 0
Post image

Apocalyptic vibes in SoCal

07.01.2025 21:42 πŸ‘ 0 πŸ” 0 πŸ’¬ 0 πŸ“Œ 0