Compact deep neural network models of the visual cortex
Nature - Parsimonious deep neural network models can be used for prediction of visual neuron responses.
DNN models of the brain are getting bigger. Are we replacing one complicated system in vivo with another in silico?
In new work, we seek the *smallest* DNN models of visual cortex, balancing prediction with parsimony.
It turns out these compact models are surprisingly small!
rdcu.be/e5H8G
26.02.2026 22:32
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Come analyse some neural data!! ๐๐๐
03.03.2026 22:15
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space cells
27.02.2026 23:50
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Mission: record hippocampal place cells in zero gravity
Crew: 3 rats with electrode arrays
Vehicle: Space Shuttle Columbia
Status: data now publicly available on DANDI, 28 years later
The ratstronauts' mission is finally complete. ๐๐ h/t NASA
about.dandiarchive.org/blog/2026/02...
27.02.2026 14:54
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Mathematical Methods inย Computational Neuroscience
Summer school in Eresfjord, Norway (July 8th - 26th, 2024)
Applications are now open for the summer school: ๐๐๐ญ๐ก๐๐ฆ๐๐ญ๐ข๐๐๐ฅ ๐๐๐ญ๐ก๐จ๐๐ฌ ๐ข๐ง ๐๐จ๐ฆ๐ฉ๐ฎ๐ญ๐๐ญ๐ข๐จ๐ง๐๐ฅ ๐๐๐ฎ๐ซ๐จ๐ฌ๐๐ข๐๐ง๐๐
๐ง Apply before March 15: www.compneuronrsn.org
๐ Located in beautiful Eresfjord ๐ณ๐ด
๐๏ธ Between July 6-24
Supported by the @kavlifoundation.org
In collaboration with @kavlintnu.bsky.social
17.02.2026 22:22
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Go fit some neural models!!
JAX, Pynapple, Poisson GLMs; what more can you ever wish for...
29.01.2026 21:25
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Yes, fair. Though, if the LLM knows about the standardised format (NWB here), it does allow some handy prompts like: "Can you find datasets recorded from the hippocampus that provide both raw recordings and spike-sorted cells?"
It would take me a lot longer to list all of those.
21.01.2026 12:11
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qp
chat.neurosift.app/chat
does this reasonably well for DANDI/EBRAINS/OpenNeuro datasets
21.01.2026 09:45
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Pre-COSYNE Brainhack 2026
The 2026 edition of the Pre-COSYNE Brainhack in Lisbon, Portugal.
Pre-COSYNE Brainhack 2026 โ Join Us in Lisbon!
March 10โ11, 2026 โข Lisbon, Portugal
pre-cosyne-brainhack.github.io/hackathon2026/
Kick off COSYNE week with two days of hands-on, team-based hacking around real electrophysiology data, open tools, and reproducible workflows. #brainhack #cosyne2026
14.01.2026 17:56
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An overview of the Open Software Summer School 2026 schedule. There are two tracks in the first week, "Animals in Motion" and "Large Array Data". "BrainGlobe" and "Extracellular Electrophysiology" will be run in the second week.
Three weeks left to apply for the Neuroinformatics Unit Open Software Summer School, August 17-28 2026 in London, UK!
Bringing together researchers and open source developers of ephys, behaviour and image analysis tools.
neuroinformatics.dev/open-softwar...
Deadline January 31st. Apply now!
09.01.2026 16:10
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2025: A Review of the Year in Neuroscience
Enlightening the brain
Just published my review of neuroscience in 2025, on The Spike.
The 10th of these, would you believe?
This year we have foundation models, breakthroughs in using light to understand the brain, a gene therapy, and more
Enjoy!
medium.com/the-spike/20...
30.12.2025 15:52
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A ๐ spotted in the wild at @edinburgh-uni.bsky.social!
Great crash course on neuro data processing with @pynapple.bsky.social and @spikeinterface.bsky.social delivered by @matthiashennig6.bsky.social, @wulfdewolf.bsky.social and Chris Halcrow. So nice to see both libraries working so well together
21.10.2025 16:24
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The postsubiculum as a head-direction cortex
The organisation of thalamocortical networks follows a conserved structure. Traditionally, these are divided into primary sensory systems that receiveโฆ
Really excited to share this Opinion piece we've been working on with fellow head-direction cell geeks @apeyrache.bsky.social @desdemonafricker.bsky.social and (bsky-less?) Andrea Burgalossi! While head-direction cells pop up in many cortical regions, we think that one of them is quite unique (1/8)
15.10.2025 20:10
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@benjocowley.bsky.social @david-klindt.bsky.social
@dinanthos.bsky.social
Would love to hear what you think!
19.09.2025 12:55
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We present our preprint on ViV1T, a transformer for dynamic mouse V1 response prediction. We reveal novel response properties and confirm them in vivo.
With @wulfdewolf.bsky.social, Danai Katsanevaki, @arnoonken.bsky.social, @rochefortlab.bsky.social.
Paper and code at the end of the thread!
๐งต1/7
19.09.2025 12:37
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Finally preprinted! TL;DR: thalamic head-direction neurons can shape their activity regardless of input. Big thanks to @apeyrache.bsky.social and master experimentalist @sskromne.bsky.social .
16.09.2025 20:25
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New workshop! Just before SFN, join the Flatiron Institute Center for Computational Neuroscience of the Simons Foundation for a workshop on pynapple and NeMoS. Learn how to use these open-source packages to analyze and model neural data! Accommodation & meals provided. Link โฌ๏ธ
25.08.2025 18:29
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Excited to share our new pre-print on bioRxiv, in which we reveal that feedback-driven motor corrections are encoded in small, previously missed neural signals.
07.04.2025 14:54
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any chance I can still get the call link?
registrations are closed...
05.03.2025 13:06
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We are pleased to be partnering with The UKRI AI CDT in Biomedical Innovation at the School of Informatics (University of Edinburgh). These PhD projects have a strong translational focus and seek to develop & apply AI approaches to biomedical domains โจ.
Apply by 20 Jan www.ai4biomed.io/how-to-apply/
16.01.2025 10:53
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Network model with excitatory feedforward connections (W) and recurrent inhibitory connections (M).
Check our latest work towards understanding learning and local plasticity in the brain with @matthiashennig6.bsky.social at @edinburgh-uni.bsky.social ๐ง
Published in a @neuripsconf.bsky.social workshop this year. Now out on arxiv - arxiv.org/abs/2501.02402
14.01.2025 18:08
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Both the people and the environment at CSHL made my summer there the best I've ever had.
If you want to learn about neuroscience<->AI and meet interesting people, it would be a waste not to apply!
for better visibility: video of the Olney house woodpecker that made sure I was up on time every day
11.12.2024 17:44
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Projects for 2025 entry โ UKRI AI CDT in Biomedical Innovation
PhD project!
For those interested in NeuroAI: "Using large scale neural network models to bridge the translational gap from animal models to human insights in autism spectrum and neurodevelopmental disorders"
Apply here: www.ai4biomed.io/research/pro...
26.11.2024 18:56
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Now!
Or more likely, people should change what they think place cells mean.
22.11.2024 18:41
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Will give it a try! Thanks!!
22.11.2024 17:50
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Can't such much smart on CA2/3, will have to read up!
My only thought was that if (CA1) place cells "respond to the sequence of sensory inputs leading to a location",
then similar snapshots of activity will most often encode different things.
PCA only sees the instantaneous patterns, no sequences.
22.11.2024 17:34
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The paper doesn't look at place cells explicitly, but assuming everything transfers: at what point do we decide not to call it a place cell anymore?
22.11.2024 17:22
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