Sagrika Chugh

Last speaker for #MIGsymposium2025 @mig-unimelb.bsky.social is @jiadongm.bsky.social talking on integrating more than 3 omics using DIVAS.

@ellispatrick.bsky.social teaching us about digital dissection in his talk on statistical advances for spatial omics analyses. @mig-unimelb.bsky.social #MIGsymposium2025

@em6wong.bsky.social kicking off our last session @mig-unimelb.bsky.social #MIGsymposium2025
talking about how exercise can slow molecular aging in the heart.

Did you know there are 800 species of eucalyptus 😮 learned that from Barabara Holland’s talk on how eucalyptus adapts to drought. #MIGsymposium2025 @mig-unimelb.bsky.social

@davisjmcc.bsky.social now talking about denoising image based spatial transcriptomics data @mig-unimelb.bsky.social #MIGsymposium2025

www.biorxiv.org/content/10.1...

Next up at #MIGsymposium2025 is @annatrigos.bsky.social talking about if we are actually capturing spatial patterns from tissues by profiling single 2D tissue sections. @mig-unimelb.bsky.social

Kicking off #MIGsymposium2025 is Shihua Zhang from Chinese Academy of Sciences taking us through multiple tools developed in his group for intelligent decoding of spatial biology.
@mig-unimelb.bsky.social

Keeping up the #ABACBS2025 spirit today at @mig-unimelb.bsky.social symposium.
This year symposium is all about cutting edge methods in omics.

a baby with a fist in the air and the words mission accomplished below him ALT: a baby with a fist in the air and the words mission accomplished below him

Mission accomplished!!

Thanks and you too 🫶

Did my best to help a bit to get academic twitter back. Hopefully we can continue. Thanks and congratulations to @jovmaksimovic.bsky.social too.
Thanks @abacbs.bsky.social #ABACBS2025 for an amazing conference.

Great work Gunjan!!

Chelsea Mayoh gave one of the most inspiring talks of the conference. Performing RNA-seq on kids with cancer in Australia has been highly successful in generating reportable findings, treatment recommendations, correcting diagnoses and mostly importantly, improving survival. #abacbs2025

Congratulations Hiruna Samarakoon (yet to be on bluesky) for winning the #abacbs2025 “Torsten Seemann” Outstanding Bioinformatics Software Developer Award!!! 🎉🎉🎉

Melbourne Integrative Genomics, UniMelb @mig-unimelb.bsky.social at #ABACBS2025
Amazing to have a big representation at @abacbs.bsky.social held in Adelaide.

Uncovering biological patterns across studies through automated large-scale reanalyses of public transcriptomic data Large amounts of transcriptomic data have been made available in public repositories. Systematic reanalyses of these data offer the potential to identifying conserved biological patterns or context-sp...

Kevin Chen from the University of Western Australia shared how we can use LLMs to analyse public RNA seq datasets using UORCA www.biorxiv.org/content/10.1...

#ABACBS2025 @abacbs.bsky.social

Targeted sequencing and iterative assembly of near-complete genomes - Nature Communications Long-read sequencing enables high-quality genome assemblies, but challenges remain. Here, the authors introduce Cornetto, a method that improves assembly quality, enables genome sequencing from saliva...

Our cornetto work is now published at www.nature.com/articles/s41...

It can do near-T2T assembly using @nanoporetech.com adaptive sampling
- with less 💸
- reference agnostic, so works for non-humans
- not just blood, even saliva

Just presented at #abacbs2025 yesterday.

Such a cool and interesting talk by Dr Sally Lau @lausally.bsky.social on Octopus DNA and the collapse of Ice sheets in Antarctic!
#Confbingo update - presentation on dangerous animals ✅✅ #ABACBS2025

Our prez @jessmar.bsky.social gave a shout-out to our Slack shameless-plugs channel. We’re all about boosting our members, which is why we’re leaning into Bluesky. Papers shared here get indexed by Altmetric, so growing this community turns into real, measurable impact for our members #ABACBS2025

A girl in an orange top and jeans standing in front of a poster board which illustrates aspects of inclusion and diversity in the Australian bioinformatics and computational society.

Thanks so much to the 113 people who have answered the survey! If you haven’t already you can find it at lnkd.in/gJGfxftq or come see me at our poster! @abacbs.bsky.social #ABACBS2025

Chelsea Mayoh at #abacbs2025: "If you're not using RNA-seq in your precision medicine program you're probably missing stuff"! Great to see @aliciao.bsky.social lab tools MINTIE, ALLsorts and TALLsorts making an appearance 🎉

Did you vote? If not, I don’t think so you can now. Try your luck
#ABACBS2025 @abacbs.bsky.social

#ABACBS2025

iplotx by Fabio Zanini supports visualising any network or tree analysis library. Can’t wait to visualise assembly graphs with iplotx! 🤩💻 #ABACBS2025 @abacbs.bsky.social

GitHub - fabilab/iplotx: Visualise networks and trees in Python, with style. Visualise networks and trees in Python, with style. - fabilab/iplotx

Fabio’s talk on iplotx in #ABACBS2025 is one of my favorite! I mean who doesn’t need a network plot with style?? github.com/fabilab/iplotx

GitHub - DavidsonGroup/CONCERT_DR: CONCERT_drug repurposing CONCERT_drug repurposing. Contribute to DavidsonGroup/CONCERT_DR development by creating an account on GitHub.

Great work by Hengxin Pan presenting at #abacbs2025 from @nadia-davidson.bsky.social lab @wehi-research.bsky.social CONCERTDR: an R package with a comprehensive suite of tools for drug response data analysis
github.com/DavidsonGrou...

It was great to present TRECA at ABACBS 2025 as a lightening talk.

Come find my poster #21.

#ABACBS2025 @abacbs.bsky.social

Learn how to ATAClone on Friday 29 Nov 9.00 am @ Room 506, Festival Tower
github.com/TrigosTeam/A...

#ABACBS2025 @lachlancain.bsky.social @abacbs.bsky.social @annatrigos.bsky.social

Tom Litfin on LMIBoltz -optimising VRAM in the AF3-like model Boltz2 in modelling huge complexes - saving us from getting a bigger GPU! #ABACBS2025

With Slorado, now you have more choices for GPUs when basecalling @nanoporetech.com sequencing data. This is a work we collaborated on with AMD, led by
PhD candidate @bonson-wong.bsky.social (poster at #abacbs2025) and great to see being highlighted in the AMD blog: www.amd.com/en/blogs/202...