Yes Alex! This is such a beautiful idea and result. Congratulations on having it done-done. Instant classic.
Yes Alex! This is such a beautiful idea and result. Congratulations on having it done-done. Instant classic.
Pleased to share the final version of this behemoth of a paper, now finally published. I guess I can retire now?
www.nature.com/articles/s41...
More functional data, many thousands of words removed, and a few other updates from last year's preprint.
Papers are like buses... You wait for ages, then two come along at once.
Huge congrats to @bornanovak.bsky.social and @jefflotthammer.bsky.social for pushing and driving every aspect of this work, preprinted ~1 year ago to the day (Friday before BPS), now published!
www.nature.com/articles/s41...
Pabloโs work on โcondensate Deborah numbersโ is now out in #JCP!! Selected as Editorโs Pick and featured as a #Scilight
pubs.aip.org/aip/jcp/arti...
I am excited to share the main piece of work from my PhD! In this paper, we investigated the propensities of distinct transcripts in associating with biomolecular condensates, mainly focusing on how heat-induced mRNAs escape condensation and are properly translated.
www.biorxiv.org/content/10.6...
Long in the making, but happy to present the Chlamydomonas chlororibosome!
Cryo-ET๐ฌreveals a large new domain on the small subunit, built from multiple extensions in conserved ribosomal proteins.
bioRxiv ๐: shorturl.at/q44tG
This suggests greater chlororibosome diversity than expected!
1/n ๐งต
Happy to share this new, very intentional chapter. I have left UCLA after 14 years to join the University of Colorado Anschutz as Professor of Biomedical Informatics and Neurosurgery and the inaugural Marsico Chair in Excellence in Functional Precision Medicine/n
news.cuanschutz.edu/dbmi/cu-ansc...
Out on the #bioRxiv in collaboration with @luciastrader.bsky.social, we probe the molecular basis for thermoresponsive condensation in plants! Work led by Sunita Pathak and @ananyac2000.bsky.social ๐ฅณ๐ฅณ
www.biorxiv.org/content/10.6...
How does protein folding change inside biomolecular condensates?
Our new preprint put forwards a framework for predicting this!! ๐ฅณ๐ฅณ๐ฅณ๐ฅณ work by the talented @nathanieldhess.bsky.social
How titus organizes computational projects: a (very) short presentation. Comments welcome ;)
Painted portrait of Isaac Newton, who is looking slightly to his left. He has a long, wolffish face with a pale complexion and red lips. Newtonโs hair is shoulder length and graying - the painting was made when he was 46 years old. He wears a dark coat and white shirt with a frilly collar.
Physicist and mathematician Isaac Newton was born #OTD in 1643.
Newton revolutionized our understanding of mathematics, mechanics, gravity, and optics. Later in life he served as warden of the Royal Mint, reforming currency and foiling counterfeiters. ๐งช ๐ญ โ๏ธ ๐ช
Portrait: B. Bramley, after G. Kneller
Physicist Leo Szilard, in a short science fiction story from 1948, describing how to retard science by making the funding application longer and harder than the proposed research - now called the โSzilard pointโ
very unusual - a tRNA regulated anion channel
(1/n) What if you never had to make your bed? What if your laundry could fold itself? Folding is everywhere around us - but did you know that folding flat sheets are at the โค๏ธ of diversity of shapes in the animal world - since 500 million years ago. Our latest work: www.youtube.com/watch?v=nudC...
Faculty position at the department of medicine, University of Chicago. Please share.
๐จPreprint 2/2: Several studies implicate condensates in RTK fusion onco-signaling. So we were surprised to find that condensates are entirely dispensable๐ฎ(!). A study from proteins to mice, by dynamic duo @davidgonzmar.bsky.social and @trmumford.bsky.social.
www.biorxiv.org/content/10.6...
๐
๐จNew preprint(1/2)! We show that RTK fusion oncoproteins broadly suppress EGFR signaling. How? Sequestration of adapters as the shared principle.
Led by superb PhD student Carol Gao.
www.biorxiv.org/content/10.1...
Implications for drug tolerance/resistance, and includes one big surprise๐ซง.๐
Organelles do NOT have a single uniform pH.
And if you think they must, because โprotons diffuse fast,โ this paper is for you.
A thread on why that assumption is wrong; and what we found instead. ๐งต 1/n
Have you ever wondered: just how strong *is* the evidence for Muller's ratchet on mtDNA?
Well, wonder no more!
(Project led by Yu Mo, with @smishra677.bsky.social and @yadirapga.bsky.social)
"No molecular evidence for Muller's ratchet in mitochondrial genomes"
www.biorxiv.org/content/10.6...
Become a colleague in my department!
Applications close in four days, December 15.
Incredible thread
"I, at any rate, am convinced that He is not playing at dice."
Einstein sent a letter to Max Born #OTD in 1926, in which he gave his oft-quoted objection to the probabilistic interpretation of the wavefunction in quantum mechanics. ๐งช โ๏ธ
You may be surprised by where this is headed. (1/n)
New preprint with @pyjiang.bsky.social and @kelleyharris.bsky.social! The discovery and patterns of the underlying long-standing mild-effect mutator alleles in S. cerevisiae populations www.biorxiv.org/content/10.1...
Our review on the physics of phase separation in cells has been published by Rep. Prog. Phys. ๐ doi.org/10.1088/1361...
We hope that the text and citations are helpful for anyone interested in physical descriptions of condensates in cells!
Hot off the press! Our latest paper led by @fernpizza.bsky.social, understanding how plasmids evolve inside cells. These small, self-replicating DNA circles live inside bacteria and carry antibiotic resistance genes, but also compete with one another to replicate. 1/
www.science.org/doi/10.1126/...
Incredible workโcongrats Josh and the whole team! What a way to begin! ๐คฉ
(2/10) We found that disparate drivers of acute myeloid leukemia (AML) โ including NPM1c, KMT2A-r, and nucleoporin oncofusions โ form nuclear condensates with a shared set of proteins including XPO1 and MENIN to drive leukemic gene expression (e.g. HOXA). www.cell.com/cell/fulltex...
(1/10) How do diverse leukemia mutations converge on the same molecular program? In #RibackLab first manuscript @cp-cell.bsky.social, collaboration with @goodell-lab.bsky.social shows that disparate mutations rewire shared protein networks to form nuclear condensates called C-bodies.
My department at UT Austin is looking to hire an Assistant Professor in Evolutionary Biology, broadly defined. Feel free to reach out to me with any questions you may have.
apply.interfolio.com/177547
Us too! A very challenging review process made much more relaxing because the story was out. Reviewer comments helped us refine the presentation but did not change the claims.